Entity_Type:
Entity_Type_Label: NearshoreBenthicSystemsInGOA_SOP01_SeaOtterMortality2006-2017
Entity_Type_Definition:
Sea otter carcasses and skulls found while performing beach surveys in Prince William Sound, Katmai National Park and Preserve and Kenai Fjords National Park.
Entity_Type_Definition_Source: producer defined
Attribute:
Attribute_Label: Year
Attribute_Definition: The year during which the sample was collected.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 2006
Range_Domain_Maximum: 2017
Attribute:
Attribute_Label: CollectionDate
Attribute_Definition:
The date, if recorded, on which the sample was collected. For some specimens only a year was recorded, for others a month and year, while some have month, day, and year. If no collection date was recorded, there will be a "." in this field.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 4-Apr-2006
Range_Domain_Maximum: 7-Oct-2017
Attribute:
Attribute_Label: OtterNum
Attribute_Definition:
The unique number assigned to the carcass specimen, usually a skull but can be a portion of a skull or even just a tooth or pup natal pelt. This should be the code marked on any specimens collected from the carcass and is also the code used to keep track of age data from the lab. This code is only semi-consistent and contains an abbreviation SOD for 'sea otter dead', a four digit year, and a sequential number. It may also contain a location code such as KATM for Katmai. Specimens may be marked with a two-digit year rather than four. Specimens may also have the code in different order on labels, KATM-SOD-2007-12 is the same as SOD-KATM-07-12. Also, sometimes the dash '-' was not used, so SOD2007-12 is the same as SOD-2007-12.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Unrepresentable_Domain:
Otter identification number usually includes a prefix, SOD (Sea Otter Dead), and/or area information (KATM = Katmai or APD = Alaska Peninsula Dead), then a date code (2 or 4 numbers) then a sequential number. For example KATM-SOD-2013-11 is the eleventh specimen recorded in 2013 from Katmai National Park and Preserve. Numbering schemes were not consistent in inclusion of location codes.
Attribute:
Attribute_Label: Region
Attribute_Definition:
Broad geographic locations dividing the northern sea otter population stocks in Alaska.
Attribute_Definition_Source:
producer defined, but see: Gorbics, C.S., and J.L. Bodkin. 2001. Stock structure of sea otters (Enhydra lutris kenyoni ) in Alaska. Marine Mammal Science 17(3):632-647.
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: SC
Enumerated_Domain_Value_Definition:
Southcentral Alaska, from Cape Yakataga westward to Cape Douglas including Prince William Sound and the Kenai peninsula coast
Enumerated_Domain_Value_Definition_Source:
Gorbics, C.S., and J.L. Bodkin. 2001. Stock structure of sea otters (Enhydra lutris kenyoni ) in Alaska. Marine Mammal Science 17(3):632-647.
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: SE
Enumerated_Domain_Value_Definition:
Southeast Alaska, from Dixon entrance northward to Cape Yakataga.
Enumerated_Domain_Value_Definition_Source:
Gorbics, C.S., and J.L. Bodkin. 2001. Stock structure of sea otters (Enhydra lutris kenyoni ) in Alaska. Marine Mammal Science 17(3):632-647.
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: SW
Enumerated_Domain_Value_Definition:
Southwest Alaska, including the Alaska Peninsula coast, southward and westward along the Aleutians to Attu Island including Barren Islands, Kodiak Archipelago, Pribilof Islands, and Bristol Bay.
Enumerated_Domain_Value_Definition_Source:
Gorbics, C.S., and J.L. Bodkin. 2001. Stock structure of sea otters (Enhydra lutris kenyoni ) in Alaska. Marine Mammal Science 17(3):632-647.
Attribute:
Attribute_Label: GulfWatchRegion
Attribute_Definition:
Broad geographic locations dividing Alaska as part of the Nearshore component of the Gulf Watch Alaska monitoring program.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: AKP
Enumerated_Domain_Value_Definition: Alaska Peninsula
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: KEP
Enumerated_Domain_Value_Definition: Kenai Peninsula
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: PWS
Enumerated_Domain_Value_Definition: Prince William Sound
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute:
Attribute_Label: Area
Attribute_Definition:
Broad geographic locations dividing Alaska: Blocks from the Gulf Watch Alaska nearshore monitoring program or Fish and Wildlife Service management units for carcasses from the SW region.
Attribute_Definition_Source:
producer defined, also for SW management units see: U.S. Fish and Wildlife Service (USFWS). 2013b. Southwest Alaska Distinct Population Segment of the Northern Sea
Otter (Enhydra lutris kenyoni) - Recovery Plan. U.S. Fish and Wildlife Service, Region 7, AK, USA.
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: KATM
Enumerated_Domain_Value_Definition:
Katmai National Park and Preserve, Block 10 of the Gulf Watch Nearshore Monitoring design
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: KEFJ
Enumerated_Domain_Value_Definition:
Kenai Fjords National Park and Preserve, Block 05 of the Gulf Watch Nearshore Monitoring design
Enumerated_Domain_Value_Definition_Source:
USGS Alaska Science Center Nearshore Marine Ecosystem Research Group
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: NPWS
Enumerated_Domain_Value_Definition:
Northern Prince William Sound, Block 07 of the Gulf Watch Nearshore Monitoring design
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: WPWS
Enumerated_Domain_Value_Definition:
Western Prince William Sound Block 08 of the Gulf Watch Nearshore Monitoring design
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute:
Attribute_Label: Site
Attribute_Definition:
Narrower geographic location than area. A general description of where a carcass was discovered. When fins scale location information is missing, this field will have a "."
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Unrepresentable_Domain:
In general sites are names from NOAA charts of the area and may have some directional term attached, for example, Perry Isl south.
Attribute:
Attribute_Label: Age
Attribute_Definition:
Age of otter from various age estimation methods. "." indicates no data, "L" indicates results not returned from laboratory at the time of data publication.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 0
Range_Domain_Maximum: 20
Attribute:
Attribute_Label: HowEstimated
Attribute_Definition:
What methodology was used to estimate an age for the carcass. "." indicates no data.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: E
Enumerated_Domain_Value_Definition:
Age estimated by sea otter experts based on tooth wear patterns of all teeth present, development and size of teeth, and overall skull size. This method may only be used by trained experts and if most teeth are present in the carcass.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: I
Enumerated_Domain_Value_Definition: Age estimated by lab staff based on tooth morphology and wear.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: S
Enumerated_Domain_Value_Definition:
Characteristics of the skull and teeth used to identify pups: sutures of the skull not fused and deciduous teeth present.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: T
Enumerated_Domain_Value_Definition: Matson's laboratory tooth cementum layer aging
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute:
Attribute_Label: FieldAgeEstimate
Attribute_Definition:
Age of otter by field observers using tooth wear, tooth eruption patterns, morphometric size, and other clues. May be given as a year, range of years, or an age class such as 'adult' or 'pup', etc.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Unrepresentable_Domain:
Field age estimates range from 0-18 years and also include categorical age classes such as pup (P), juvenile (J), subadult (SA), adult (A), aged adult (AA). "." indicates no data.
Attribute:
Attribute_Label: AgeClass
Attribute_Definition:
Broad category of ages. "." indicates no data available to determine age class.
Attribute_Definition_Source:
Monson, D.H., Doak, D.F., Ballachey, B.E. and Bodkin, J.L. (2011), Could residual oil from the Exxon Valdez spill create a long‐term population “sink” for sea otters in Alaska?. Ecological Applications, 21: 2917-2932. and Ballachey, B.E., Monson, D.H., Esslinger, G.G., Kloecker, K., Bodkin, J., Bowen, L., and Miles, A.K., 2014. 2013 update on sea otter studies to assess recovery from the 1989 Exxon Valdez oil spill, Prince William Sound, Alaska: U.S. Geological Survey Open-File Report 2014-1030, 40 p.,
http://dx.doi.org/10.3133/ofr20141030.
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: 1
Enumerated_Domain_Value_Definition: juvenile age class, otter age is less than two years old
Enumerated_Domain_Value_Definition_Source:
Monson, D.H., Doak, D.F., Ballachey, B.E. and Bodkin, J.L. (2011), Could residual oil from the Exxon Valdez spill create a long‐term population “sink” for sea otters in Alaska?. Ecological Applications, 21: 2917-2932. and Ballachey, B.E., Monson, D.H., Esslinger, G.G., Kloecker, K., Bodkin, J., Bowen, L., and Miles, A.K., 2014. 2013 update on sea otter studies to assess recovery from the 1989 Exxon Valdez oil spill, Prince William Sound, Alaska: U.S. Geological Survey Open-File Report 2014-1030, 40 p.,
http://dx.doi.org/10.3133/ofr20141030.
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: 2
Enumerated_Domain_Value_Definition:
prime age class, otter age is greater than or equal to two years old and less than or equal to eight years old
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: 3
Enumerated_Domain_Value_Definition: aged adult age class, otter age is greater than eight years old
Enumerated_Domain_Value_Definition_Source:
Monson, D.H., Doak, D.F., Ballachey, B.E. and Bodkin, J.L. (2011), Could residual oil from the Exxon Valdez spill create a long‐term population “sink” for sea otters in Alaska?. Ecological Applications, 21: 2917-2932. and Ballachey, B.E., Monson, D.H., Esslinger, G.G., Kloecker, K., Bodkin, J., Bowen, L., and Miles, A.K., 2014. 2013 update on sea otter studies to assess recovery from the 1989 Exxon Valdez oil spill, Prince William Sound, Alaska: U.S. Geological Survey Open-File Report 2014-1030, 40 p.,
http://dx.doi.org/10.3133/ofr20141030.
Attribute:
Attribute_Label: ToothCollected
Attribute_Definition:
Was a tooth collected to be submitted to the lab for cementum age analysis? "." indicates no data.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: N
Enumerated_Domain_Value_Definition: No, a tooth was not collected.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: U
Enumerated_Domain_Value_Definition: It is unknown whether or not a tooth was collected.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: Y
Enumerated_Domain_Value_Definition: Yes, a tooth was collected.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute:
Attribute_Label: Tooth
Attribute_Definition:
Which tooth was collected and sent to the laboratory for cementum aging. "." indicates no data.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: C
Enumerated_Domain_Value_Definition:
Canine tooth, variations include LC = lower canine, LLC = lower left canine, RC = right canine, UC = upper canine, ULC = upper left canine, URC = upper right canine. Lack of upper or lower or right or left indicates those are unknown.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: I
Enumerated_Domain_Value_Definition:
Incisor tooth, variations include LI = lower incisor, LI2 = lower second incisor, UI = upper incisor, ULI = upper left incisor, ULI2 = upper left second incisor, ULI3 = upper left third incisor, URI2 = upper right second incisor, URI3 = upper right third incisor. Lack of upper or lower or right or left or a number indicates those are unknown.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: M
Enumerated_Domain_Value_Definition:
Molar tooth, variations include M1 = first molar, LLM = lower left molar, LLM1 = lower left first molar, LLM2 = lower left second molar, ULM = upper left molar, ULM1 = upper left first molar, URM = upper right molar, URM1 = upper right first molar. Lack of upper or lower or right or left or a number indicates those are unknown.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: P
Enumerated_Domain_Value_Definition:
Premolar tooth, variations include P1 = first premolar, P2 = second premolar, P3 = third premolar, LLP = lower left premolar, LP = lower premolar, LP1 = lower first premolar, LP2 = lower second premolar, LP3 = lower third premolar, LLP2 = lower left second premolar, LLP4 = lower left fourth premolar, LRP = lower right premolar, LRP2 = lower right second premolar, LRP3 = lower right third premolar, LRP4 = lower right fourth premolar, UP = upper premolar, UP2 = upper second premolar, ULP = upper left premolar, ULP1 = upper left first premolar, ULP2 = upper left second premolar, ULP3 = upper left third premolar, URP = upper right premolar, URP1 = upper right first premolar, URP2 = upper right second premolar, URP3 = upper right third premolar, URP4 = upper right fourth premolar. Lack of upper or lower or right or left or a number indicates those are unknown.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: NS
Enumerated_Domain_Value_Definition:
It is unknown which tooth was collected, but the lab notes it is a non-standard tooth, therefore something other than a first premolar.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: UNK
Enumerated_Domain_Value_Definition: It is unknown which tooth was collected.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute:
Attribute_Label: CertaintyCode
Attribute_Definition:
Certainty Code is a reliability index for the tooth cementum age. "." indicates no data.
Attribute_Definition_Source:
Gary and Judy Matson, 1981. Workbook for Cementum Analysis. Published in Milltown Montana 59851.
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: A
Enumerated_Domain_Value_Definition:
Reliability ages indicate that the cementum characteristics of the tooth section very nearly match those of the standardized cementum aging model for the species and tooth type. Most certain, within +/- 1 year of reported toothage.
Enumerated_Domain_Value_Definition_Source:
Gary and Judy Matson, 1981. Workbook for Cementum Analysis. Published in Milltown Montana 59851
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: B
Enumerated_Domain_Value_Definition:
There is histological evidence to support the result, and the correct age is expected to be within the range given in the “Notes” field. Usually age within +/- 2 years of reported toothage.
Enumerated_Domain_Value_Definition_Source:
Gary and Judy Matson, 1981. Workbook for Cementum Analysis. Published in Milltown Montana 59851
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: C
Enumerated_Domain_Value_Definition:
Those for which the match between histological evidence and the standardized model is poor. Error is likely, and may occur within the range given.
Enumerated_Domain_Value_Definition_Source:
Gary and Judy Matson, 1981. Workbook for Cementum Analysis. Published in Milltown Montana 59851
Attribute:
Attribute_Label: MatsonAgeRange
Attribute_Definition:
Range of tooth age for the otter provided by Matson. The range is larger when the certainty is lower.
Attribute_Definition_Source:
Gary and Judy Matson, 1981. Workbook for Cementum Analysis. Published in Milltown Montana 59851
Attribute_Domain_Values:
Unrepresentable_Domain:
Age range is given as a spread of ages, such as 1-2 or 11-13. Values are years. Missing entries in this field indicate certainty in the age and no need to also provide a range or no age was estimated.
Attribute:
Attribute_Label: MatsonNotes
Attribute_Definition:
Notes from the lab where the cementum aging is performed. Some standardized abbreviations are used in addition to free text. "." indicates no notes from the lab.
Attribute_Definition_Source:
Gary and Judy Matson, 1981. Workbook for Cementum Analysis. Published in Milltown Montana 59851
Attribute_Domain_Values:
Unrepresentable_Domain:
Standardized notes are: AH = abnormal histology, usually removal of tooth tissue; BR = broken, with missing cementum; BL = bleached or boiled; CD = cementum damaged; IN = aged by inspection, without sectioning; LI = lateral incisor (nonstandard); M = molar; NA = not applicable, evidence in the cementum is not adequate even for a reasonable age estimate; NE = the sample contained no envelope with this ID number; NG = the tooth is present in the sample but is not given on the biologist's master inventory list; NP = not processed; NS = not a standard tooth type for cementum aging; NTR = no tooth received, container was empty; P or PM = premolar; PF = Matson's Lab process failure; PR = processed.
Attribute:
Attribute_Label: Sex
Attribute_Definition: Sex of the otter
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: F
Enumerated_Domain_Value_Definition:
Female, absence of baculum in a complete carcass or known otter from capture studies.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: M
Enumerated_Domain_Value_Definition: Male, baculum present or known otter from capture studies.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: U
Enumerated_Domain_Value_Definition: Unknown sex
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute:
Attribute_Label: Latitude
Attribute_Definition:
Latitude of location where carcass was found. "." indicates no data.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: 56.70466
Range_Domain_Maximum: 60.9433
Attribute_Units_of_Measure: decimal degrees
Attribute:
Attribute_Label: Longitude
Attribute_Definition:
Longitude of location where carcass was found. "." indicates no data.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Range_Domain:
Range_Domain_Minimum: -157.55983
Range_Domain_Maximum: -147.24904
Attribute_Units_of_Measure: decimal degrees
Attribute:
Attribute_Label: location quality
Attribute_Definition:
Indication of how precise the latitude and longitude were for the location of the carcass. "." indicates no data. Note that extremely accurate locations are not essential to use of carcass age at death data for many purposes.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: 1
Enumerated_Domain_Value_Definition:
The finder of the carcass also recorded a collection location at the site of collection. This should be accurate to within plus/minus 15 meters based on our handheld GPS technology.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: 2
Enumerated_Domain_Value_Definition:
The latitude and longitude refer to a location determined by the carcass collector but not at the time of collection. Assignment of the coordinates was done post field collection, but often during the same field trip. For example, the collector did not have a hand held GPS while collecting the specimen and later used marine charts or any mapping program to estimate the collection coordinates. Collection accuracy is likely plus or minus 1-3 kilometers.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute_Domain_Values:
Enumerated_Domain:
Enumerated_Domain_Value: 3
Enumerated_Domain_Value_Definition:
The latitude and longitude refer to a general center point for a named location that was recorded by the carcass collector. Assignment of the coordinates was done post field season. Accuracy is likely plus or minus 5-10 kilometers, more if a named location is large, for example East Ninagiak vs simply Ninagiak.
Enumerated_Domain_Value_Definition_Source: producer defined
Attribute:
Attribute_Label: NotesFromField
Attribute_Definition:
Additional information from the collectors of the specimen or those who pulled teeth or processed the skull for archiving. This is not for information from the cementum processing lab.
Attribute_Definition_Source: producer defined
Attribute_Domain_Values:
Unrepresentable_Domain:
Notes can be about many topics so there is not a set domain for the content of this field.
Entity_and_Attribute_Overview:
This data set contains collection information and laboratory tooth age determinations for sea otter carcasses found in the Gulf of Alaska marine intertidal. Data includes year found, specimen ID, collection location, parts collected, and tooth age.
Entity_and_Attribute_Detail_Citation:
Dean, T. A. and J. L. Bodkin. 2011. SOP for Conducting Coastline Surveys of Birds and Mammals, Animal Carcasses, Debris and Other Resources – Version 1.1: Southwest Alaska Inventory and Monitoring. Natural Resource Report NPS/SWAN/NRR—2011/396. National Park Service, Fort Collins, Colorado.
Gary and Judy Matson, 1981. Workbook for Cementum Analysis. Published in Milltown Montana 59851