Genetic Data from Three Accipiter Species, North America, 1996-2014

Identification_Information:

Citation:

Citation_Information:

Originator: Talbot, S.L. (ORCID: 0000-0002-3312-7214)
Originator: Pierson, B.J. (ORCID: 0000-0001-8233-874X)
Originator: Sonsthagen, S.A. (ORCID: 0000-0001-6215-5874)
Originator: Haughey, C.L. (ORCID: 0000-0002-4846-6008)
Publication_Date: 20200921
Title:

Geospatial_Data_Presentation_Form: tabular digital data
Publication_Information:

Publication_Place: Anchorage, Alaska
Publisher: U.S. Geological Survey, Alaska Science Center

Other_Citation_Details:

Suggested Citation: Talbot, S.L., Pierson, B.J., Sonsthagen, S.A., Haughey, C.L., 2020, Genetic data from three accipiter species, North America, 1996-2014: U.S. Geological Survey data release, https://doi.org/10.5066/P9U28F8X

Online_Linkage: https://doi.org/10.5066/P9U28F8X
Larger_Work_Citation:

Citation_Information:

Originator: U.S. Geological Survey, Alaska Science Center
Publication_Date: 2000
Title:

Developing and Applying Molecular Tools to Natural Resource Problems in Alaska

Geospatial_Data_Presentation_Form: website
Series_Information:

Series_Name: Alaska Science Portal
Issue_Identification: 378

Publication_Information:

Publication_Place: Anchorage, Alaska
Publisher: U.S. Geological Survey, Alaska Science Center

Other_Citation_Details:

This is a link to the broader USGS Alaska Science Center research project supported by these data. Users will find a description of the research project and links to associated reports, publications, and data products.

Online_Linkage: https://alaska.usgs.gov/portal/project.php?project_id=378

Description:

Abstract:

This data set provides sample collection information and genetic data used to identify relationships between groups of North American accipiters, including one hybrid. Genetic data includes gender identification, nuclear and mtDNA sequence markers, and microsatellite genotypes derived from 20 autosomal loci (Age1302, Age1303, Age1304, Age1305, Age1306, Age1307, Age1308, Age1309, Age1310, Age1311, Age1312, Age1313, Age1314, Age1316, Age1317, Age1318, Age1319, Age1320, Age1321, and Age1322).

Purpose:

These data were collected to measure the usefulness of new microsatellite markers in three North American accipiter species and assess the existence of a suspected naturally occurring hybrid.

Time_Period_of_Content:

Time_Period_Information:

Range_of_Dates/Times:

Beginning_Date: 201301
Ending_Date: 201911

Currentness_Reference: observed

Status:

Progress: Complete
Maintenance_and_Update_Frequency: Unknown

Spatial_Domain:

Description_of_Geographic_Extent:

From New Jersey in the east to Alaska in the west and from Utah in the south to Yukon Territory, Canada in the North

Bounding_Coordinates:

West_Bounding_Coordinate: -149.18
East_Bounding_Coordinate: -74.90
North_Bounding_Coordinate: 69.63
South_Bounding_Coordinate: 38.03

Keywords:

Theme:

Theme_Keyword_Thesaurus: USGS Metadata Identifier
Theme_Keyword: USGS:ASC314

Theme:

Theme_Keyword_Thesaurus: ISO 19115 Topic Category
Theme_Keyword: Biota
Theme_Keyword: Environment

Theme:

Theme_Keyword_Thesaurus: NASA GCMD Earth Science Thesaurus
Theme_Keyword: Animals/Vertebrates
Theme_Keyword: Birds
Theme_Keyword: Eagles/Falcons/Hawks and Allies

Theme:

Theme_Keyword_Thesaurus: USGS CSA Biocomplexity Thesaurus
Theme_Keyword: Birds of prey
Theme_Keyword: Genetic diversity
Theme_Keyword: Population genetics
Theme_Keyword: Genetic variance
Theme_Keyword: Hybrids

Theme:

Theme_Keyword_Thesaurus: USGS Thesaurus
Theme_Keyword: Wildlife
Theme_Keyword: Ecological processes
Theme_Keyword: Genetics
Theme_Keyword: DNA sequencing
Theme_Keyword: Polymerase chain reaction
Theme_Keyword: Systematics and taxonomy

Theme:

Theme_Keyword_Thesaurus: MeSH-National Library of Medicine
Theme_Keyword: DNA, Mitochondrial
Theme_Keyword: Microsatellite Repeats
Theme_Keyword: Genotype

Theme:

Theme_Keyword_Thesaurus: None
Theme_Keyword: Northern Goshawk
Theme_Keyword: Accipiter gentilis
Theme_Keyword: Cooper's Hawk
Theme_Keyword: Accipiter cooperii
Theme_Keyword: Sharp-shinned Hawk
Theme_Keyword: Accipiter striatus

Theme:

Theme_Keyword_Thesaurus: None
Theme_Keyword: Age1302
Theme_Keyword: Age1303
Theme_Keyword: Age1304
Theme_Keyword: Age1305
Theme_Keyword: Age1306
Theme_Keyword: Age1307
Theme_Keyword: Age1308
Theme_Keyword: Age1309
Theme_Keyword: Age1310
Theme_Keyword: Age1311
Theme_Keyword: Age1312
Theme_Keyword: Age1313
Theme_Keyword: Age1314
Theme_Keyword: Age1316
Theme_Keyword: Age1317
Theme_Keyword: Age1318
Theme_Keyword: Age1319
Theme_Keyword: Age1320
Theme_Keyword: Age1321
Theme_Keyword: Age1322

Place:

Place_Keyword_Thesaurus: USGS Geographic Names Information System
Place_Keyword: Alaska
Place_Keyword: Utah
Place_Keyword: Minnesota
Place_Keyword: Wisconsin
Place_Keyword: New Jersey
Place_Keyword: North Dakota

Place:

Place_Keyword_Thesaurus: NGA GEOnet Names Server
Place_Keyword: Canada
Place_Keyword: British Columbia
Place_Keyword: Yukon Territory

Taxonomy:

Keywords/Taxon:

Taxonomic_Keyword_Thesaurus: None
Taxonomic_Keywords: Animals
Taxonomic_Keywords: Vertebrates
Taxonomic_Keywords: Birds

Taxonomic_System:

Classification_System/Authority:

Classification_System_Citation:

Citation_Information:

Originator: ITIS Integrated Taxonomic Information System
Publication_Date: Unknown
Title: ITIS Integrated Taxonomic Information System
Geospatial_Data_Presentation_Form: database
Series_Information:

Series_Name: Taxonomic Serial Number
Issue_Identification: TSN 175300, 175304, 175309

Publication_Information:

Publication_Place: online
Publisher: ITIS-North America

Other_Citation_Details:

Taxonomic details retrieved March 6, 2020, from the Integrated Taxonomic Information System on-line database https://www.itis.gov

Online_Linkage: https://www.itis.gov

Taxonomic_Procedures:

Samples were provided by scientists competent to identify genus Accipiter to the species level. DNA data generated in this study would have identified any incorrectly labeled samples.

Taxonomic_Classification:

Taxon_Rank_Name: Kingdom
Taxon_Rank_Value: Animalia
Taxonomic_Classification:

Taxon_Rank_Name: Subkingdom
Taxon_Rank_Value: Bilateria
Taxonomic_Classification:

Taxon_Rank_Name: Infrakingdom
Taxon_Rank_Value: Deuterostomia
Taxonomic_Classification:

Taxon_Rank_Name: Phylum
Taxon_Rank_Value: Chordata
Taxonomic_Classification:

Taxon_Rank_Name: Subphylum
Taxon_Rank_Value: Vertebrata
Taxonomic_Classification:

Taxon_Rank_Name: Infraphylum
Taxon_Rank_Value: Gnathostomata
Taxonomic_Classification:

Taxon_Rank_Name: Superclass
Taxon_Rank_Value: Tetrapoda
Taxonomic_Classification:

Taxon_Rank_Name: Class
Taxon_Rank_Value: Aves
Taxonomic_Classification:

Taxon_Rank_Name: Order
Taxon_Rank_Value: Accipitriformes
Taxonomic_Classification:

Taxon_Rank_Name: Family
Taxon_Rank_Value: Accipitridae
Taxonomic_Classification:

Taxon_Rank_Name: Genus
Taxon_Rank_Value: Accipiter
Taxonomic_Classification:

Taxon_Rank_Name: Species
Taxon_Rank_Value: Accipiter gentilis
Applicable_Common_Name: Northern Goshawk
Applicable_Common_Name: TSN 175300

Taxonomic_Classification:

Taxon_Rank_Name: Species
Taxon_Rank_Value: Accipiter striatus
Applicable_Common_Name: Sharp-shinned Hawk
Applicable_Common_Name: TSN 175304

Taxonomic_Classification:

Taxon_Rank_Name: Species
Taxon_Rank_Value: Accipiter cooperii
Applicable_Common_Name: Cooper's Hawk
Applicable_Common_Name: TSN 175309

Access_Constraints: None
Use_Constraints:

It is requested that the authors and the USGS Alaska Science Center be cited for any subsequent publications that reference this dataset.

Point_of_Contact:

Contact_Information:

Contact_Organization_Primary:

Contact_Organization: U.S. Geological Survey, Alaska Science Center

Contact_Address:

Address_Type: Mailing and Physical
Address: 4210 University Drive
City: Anchorage
State_or_Province: Alaska
Postal_Code: 99508
Country: USA

Contact_Voice_Telephone: 907-786-7000
Contact_Electronic_Mail_Address: ascweb@usgs.gov

Data_Set_Credit:

U.S. Geological Survey, Alaska Science Center, Anchorage, Alaska, USA; Cape May Raptor Banding Project, 105 Yucca Court, Pine Knoll Shores, North Carolina, USA; Department of Biology, University of Wisconsin-Stevens Point, Stevens Point, Wisconsin, USA; Functional Biosciences, Madison, Wisconsin, USA

Cross_Reference:

Citation_Information:

Originator: Haughey, C.L. (ORCID: 0000-0002-4846-6008)
Originator: Nelson, A.
Originator: Napier, P.
Originator: Rosenfield, R.N.
Originator: Sonsthagen, S.A. (ORCID: 0000-0001-6215-5874)
Originator: Talbot, S.L. (ORCID: 0000-0002-3312-7214)
Publication_Date: 2019
Title:

Genetic confirmation of a natural hybrid between a Northern Goshawk (Accipiter gentilis) and a Cooper’s Hawk (A. cooperii)

Geospatial_Data_Presentation_Form: journal article
Series_Information:

Series_Name: Wilson Journal of Ornithology
Issue_Identification: 131(4):838–844

Publication_Information:

Publication_Place: online
Publisher: Wilson Ornithological Society

Other_Citation_Details:

Haughey, C.L., Nelson, A., Napier, P., Rosenfield, R.N., Sonsthagen, S.A., Talbot, S.L. 2019. Genetic confirmation of a natural hybrid between a Northern Goshawk (Accipiter gentilis) and a Cooper’s Hawk (A. cooperii). Wilson Journal of Ornithology 131(4):838–844 doi:10.1676/1559-4491-131.4.838

Online_Linkage: https://doi.org/10.1676/1559-4491-131.4.838

Cross_Reference:

Citation_Information:

Originator: Haughey, C.L. (ORCID: 0000-0002-4846-6008)
Originator: Sage, G.K. (ORCID: 0000-0003-1431-2286)
Originator: DeGange, G.R.
Originator: Sonsthagen, S.A. (ORCID: 0000-0001-6215-5874)
Originator: Talbot, S.L. (ORCID: 0000-0002-3312-7214)
Publication_Date: 2016
Title:

Development of novel microsatellite markers for the Northern Goshawk (Accipiter gentilis) and their utility in cross-species amplification

Geospatial_Data_Presentation_Form: journal article
Series_Information:

Series_Name: Avian Biology Research
Issue_Identification: 9(3):195-199

Publication_Information:

Publication_Place: online
Publisher: SAGE Publishing

Other_Citation_Details:

Haughey, C.L., Sage, G.K., DeGange, G.R., Sonsthagen, S.A., Talbot, S.L. 2016. Development of novel microsatellite markers for the Northern Goshawk (Accipiter gentilis) and their utility in cross-species amplification. Avian Biology Research 9(3):195-199 doi:10.3184/175815516X14667737479433

Online_Linkage: https://doi.org/10.3184/175815516X14667737479433

Data_Quality_Information:

Attribute_Accuracy:

Attribute_Accuracy_Report:

Individual sample ID's, collection dates, sampling locations, numbers, and reported sex of individual samples provided by collectors were cross-checked and verified to match the accompanying worksheet. Sampling locations were verified with collectors and formally labeled and cross-referenced to the Geographic Names Information Service (GNIS) when possible. Genbank accession numbers were cross-referenced to the appropriate individual samples as recorded. For quality control purposes, DNA from two to five individuals representing each designated population were extracted, amplified, and sequenced in duplicate. We observed sterile techniques in the handling of all DNA, and all procedures were performed with positive and negative controls to provide evidence of replication without contamination. Per laboratory standard operating procedures, if discrepancies occurred, analyses were repeated until the laboratory manager was satisfied results were accurate.

Logical_Consistency_Report:

For microsatellite loci, reported allele sizes were reviewed to confirm they conform to expected distributions (e.g. dinucleotide repeats with 1 base pair differences were reviewed on gel images by laboratory personnel, gaps in allele sizes were reviewed, and single occurrences of an allele size were scrutinized). Only representative unique sequences were submitted to Genbank for partial control regions of mtDNA and partial intron 7 of beta-fibrinogen, i.e. multiple individuals may have the same accession number if the sequences are identical to the original sequence submitted to Genbank.

Completeness_Report:

Data omissions for particular entities are explained in the Entity and Attribute definitions. Blank data indicates no data were collected or not provided with the sample for a particular attribute.

Collection years are provided when available, but were not available for all samples provided to the laboratory. Field sex was not provided with all samples, nor were all field sexes confirmed with a laboratory analysis for all individuals.

Lineage:

Methodology:

Methodology_Type: Lab
Methodology_Description:

DNAs were extracted by a modified salt extraction technique (Medrano et al 1990; Sonsthagen et al 2004) or using a Qiagen Dneasy Blood and Tissue extraction kit (QIAGEN, Düsseldorf, Germany) following manufacturer’s protocol.

Methodology:

Methodology_Type: Lab
Methodology_Description:

Polymerase chain reaction (PCR) amplification and scoring of microsatellite loci followed Sonsthagen et al 2004 except the thermocycler parameters consisted of a 2 min denaturation at 94 °C, followed 40 cycles at 94°C for 15 seconds, 50°C for 15 seconds and 72 °C for 30 seconds with a final extension at 72 °C for 30 min. Microsatellite alleles were resolved on a 25 cm 6% polyacrylamide gel using a LI-COR (IR 4200) automated DNA sequencer. For quality control purposes, we extracted, amplified, and sequenced, 10% of the samples in duplicate.

Methodology:

Methodology_Type: Lab
Methodology_Description:

Polymerase chain reaction (PCR) amplification and sequencing of mtDNA control region followed Sonsthagen et al 2004 and beta-fibrinogen intron 7 loci followed Sonsthagen et al 2007 with PCR conditions following Sonsthagen et al 2007. Sequences were generated and resolved either with simultaneous bidirectional sequencing methods at the Alaska Science Center as described in Sonsthagen et al 2004 or at Functional Biosciences (Madison, Wisconsin, USA) using methods described in Sonsthagen et al 2007. For quality control purposes, we extracted, amplified, and sequenced, 10% of the samples in duplicate.

Source_Information:

Source_Citation:

Citation_Information:

Originator: Haughey, C.L.
Originator: Sage, G.K.
Originator: DeGange, G.R.
Originator: Sonsthagen, S.A.
Originator: Talbot, S.L
Publication_Date: 2016
Title:

Development of novel microsatellite markers for the Northern Goshawk (Accipiter gentilis) and their utility in cross-species amplification

Geospatial_Data_Presentation_Form: journal article
Series_Information:

Series_Name: Avian Biology Research
Issue_Identification: 9(3):195-199

Publication_Information:

Publication_Place: online
Publisher: SAGE Publishing

Other_Citation_Details:

Online_Linkage: https://doi.org/10.3184/175815516X14667737479433

Type_of_Source_Media: publication
Source_Time_Period_of_Content:

Time_Period_Information:

Single_Date/Time:

Calendar_Date: 2016

Source_Currentness_Reference: publication date

Source_Citation_Abbreviation: Haughey et al 2016
Source_Contribution:

Laboratory Technique Citation: describes microsatellite development steps, polymerase chain reaction (PCR) amplification and electrophoresis protocols.

Source_Information:

Source_Citation:

Citation_Information:

Originator: Haughey, C.L.
Originator: Nelson, A.
Originator: Napier, P.
Originator: Rosenfield, R.N.
Originator: Sonsthagen, S.A.
Originator: Talbot, S.L.
Publication_Date: 2019
Title:

Genetic confirmation of a natural hybrid between a Northern Goshawk (Accipiter gentilis) and a Cooper’s Hawk (A. cooperii)

Geospatial_Data_Presentation_Form: journal article
Series_Information:

Series_Name: Wilson Journal of Ornithology
Issue_Identification: 131(4):838–844

Publication_Information:

Publication_Place: online
Publisher: Wilson Ornithological Society

Other_Citation_Details:

Online_Linkage: https://doi.org/10.1676/1559-4491-131.4.838

Type_of_Source_Media: publication
Source_Time_Period_of_Content:

Time_Period_Information:

Single_Date/Time:

Calendar_Date: 2019

Source_Currentness_Reference: publication date

Source_Citation_Abbreviation: Haughey et al 2019
Source_Contribution:

Laboratory Technique Citation: describes polymerase chain reaction (PCR) amplification and electrophoresis protocols.

Source_Information:

Source_Citation:

Citation_Information:

Originator: Medrano, J.F.
Originator: Aasen, E.
Originator: Sharrow, L.
Publication_Date: 1990
Title: DNA extraction from nucleated red blood cells
Geospatial_Data_Presentation_Form: journal article
Series_Information:

Series_Name: Biotechniques
Issue_Identification: 8(1):43

Publication_Information:

Publication_Place: online
Publisher: Future Science, Ltd.

Other_Citation_Details:

Medrano, J.F., Aasen, E., Sharrow, L. 1990. DNA extraction from nucleated red blood cells. Biotechniques 8(1):43

Type_of_Source_Media: publication
Source_Time_Period_of_Content:

Time_Period_Information:

Single_Date/Time:

Calendar_Date: 1990

Source_Currentness_Reference: publication date

Source_Citation_Abbreviation: Medrano et al 1990
Source_Contribution:

Laboratory Technique Citation: describes DNA extraction technique.

Source_Information:

Source_Citation:

Citation_Information:

Originator: Sonsthagen, S.A.
Originator: Talbot, S.L.
Originator: White, C.M.
Publication_Date: 2004
Title:

Gene flow and genetic characterization of Northern Goshawks breeding in Utah

Geospatial_Data_Presentation_Form: journal article
Series_Information:

Series_Name: Condor
Issue_Identification: 106(4):826–836

Publication_Information:

Publication_Place: Oxford, UK
Publisher: Oxford University Press

Other_Citation_Details:

Sonsthagen, S.A., Talbot, S.L., White, C.M. 2004. Gene flow and genetic characterization of Northern Goshawks breeding in Utah. Condor 106(4):826–836.

Online_Linkage: http://www.jstor.org/stable/3247787

Type_of_Source_Media: publication
Source_Time_Period_of_Content:

Time_Period_Information:

Single_Date/Time:

Calendar_Date: 2004

Source_Currentness_Reference: publication date

Source_Citation_Abbreviation: Sonsthagen et al 2004
Source_Contribution:

Laboratory Technique Citation: describes polymerase chain reaction (PCR) amplification and electrophoresis protocols.

Source_Information:

Source_Citation:

Citation_Information:

Originator: Sonsthagen, S.A.
Originator: Talbot, S.L.
Originator: McCracken, K.G.
Publication_Date: 2007
Title:

Genetic Characterization of Common Eiders Breeding in the Yukon-Kuskokwim Delta, Alaska

Geospatial_Data_Presentation_Form: journal article
Series_Information:

Series_Name: Condor
Issue_Identification: 109(4):878-893

Publication_Information:

Publication_Place: Oxford, UK
Publisher: Oxford University Press

Other_Citation_Details:

Sonsthagen, S.A., Talbot, S.L., McCracken, K.G. 2007. Genetic Characterization of Common Eiders Breeding in the Yukon-Kuskokwim Delta, Alaska. Condor 109(4):878-893 doi:10.1093/condor/109.4.878

Online_Linkage: https://doi.org/10.1093/condor/109.4.878

Type_of_Source_Media: publication
Source_Time_Period_of_Content:

Time_Period_Information:

Single_Date/Time:

Calendar_Date: 2007

Source_Currentness_Reference: publication date

Source_Citation_Abbreviation: Sonsthagen et al 2007
Source_Contribution:

Laboratory Technique Citation: describes polymerase chain reaction (PCR) amplification and electrophoresis protocols.

Source_Information:

Source_Citation:

Citation_Information:

Originator: National Center for Biotechnology Information (NCBI)
Publication_Date: Unknown
Title: GenBank
Geospatial_Data_Presentation_Form: database
Online_Linkage: https://www.ncbi.nlm.nih.gov/genbank

Type_of_Source_Media: digital database file
Source_Time_Period_of_Content:

Time_Period_Information:

Single_Date/Time:

Calendar_Date: 2020

Source_Currentness_Reference: observed

Source_Citation_Abbreviation: NCBI GenBank
Source_Contribution:

Sequence information are publicly accessible in the NCBI Genbank database (accession numbers provided in this data package: "accipter_geneticData_Haughey_2020.csv")

Process_Step:

Process_Description:

Initial microsatellite and CHD allele sizes were determined by scoring based on PCR product size relative to an M13 DNA sequence ladder using Gene Profiler 4.05 (Scanalytics, Inc., Fairfax, VA). Subsequent gels included these known size individuals from which relative sizes of unknown individuals were assigned using Gene Profiler 4.05. For this reason, these microsatellite data cannot be combined with data generated outside the USGS Alaska Science Center without molecular size calibration between laboratories. DNA sequences were reconciled using Sequencher 4.1.2 (Gene Codes Corporation, Ann Arbor, MI) or using LI-COR eSeq imaging software with visual proofing and aligned using AlignIR 2.0 (LI-COR, Inc., Lincoln, NE).

Process_Date: Unknown

Process_Step:

Process_Description:

Representative sequences of 419 bp (JQ894325-JQ894327) or 593 bp (KU659807) of mtDNA and of 298 bp of beta-fibrinogen intron 7 were submitted to the NCBI Genbank publicly accessible genetic sequence data database.

Process_Date: Unknown
Source_Produced_Citation_Abbreviation: NCBI GenBank

Spatial_Data_Organization_Information:

Indirect_Spatial_Reference:

States and Provinces of sample collection are listed to describe generalized field sampling locations.

Entity_and_Attribute_Information:

Detailed_Description:

Entity_Type:

Entity_Type_Label: accipiter_geneticData_Haughey_1996_2014
Entity_Type_Definition:

Table with sample identifying information, collection data, allele scores (in base pairs) for 20 autosomal microsatellite loci (Age1302, Age1303, Age1304, Age1305, Age1306, Age1307, Age1308, Age1309, Age1310, Age1311, Age1312, Age1313, Age1314, Age1316, Age1317, Age1318, Age1319, Age1320, Age1321, and Age1322), and partial information for field and molecular sexes, mtDNA control region and beta-fibrinogen intron 7 sequence accessions. Presented in a Comma Separated Value (CSV) formatted table.

Entity_Type_Definition_Source: Author defined

Attribute:

Attribute_Label: labID
Attribute_Definition:

USGS Alaska Science Center, Molecular Ecology Laboratory (MEL) alphanumeric label that uniquely identifies each sample.

Attribute_Definition_Source: Author defined
Attribute_Domain_Values:

Unrepresentable_Domain:

Unique identifier; an alphanumeric code for each individual sample in this dataset.

Attribute:

Attribute_Label: species
Attribute_Definition:

This indicates the species of a sample based upon field identification and verified by genetic analyses.

Attribute_Definition_Source: Author defined
Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: Accipiter gentilis
Enumerated_Domain_Value_Definition: Scientific name for Northern Goshawk
Enumerated_Domain_Value_Definition_Source: Author defined

Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: Accipiter cooperii
Enumerated_Domain_Value_Definition: Scientific name for Cooper's Hawk
Enumerated_Domain_Value_Definition_Source: Author defined

Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: Accipiter striatus
Enumerated_Domain_Value_Definition: Scientific name for Sharp-shinned Hawk
Enumerated_Domain_Value_Definition_Source: Author defined

Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: NOGOxCOHA
Enumerated_Domain_Value_Definition: Putative hybrid of a Northern Goshawk and Cooper's Hawk
Enumerated_Domain_Value_Definition_Source: Author defined

Attribute:

Attribute_Label: collection_start
Attribute_Definition:

The starting date of the field sample collection. Zero-zero's (00) in month and day digits indicate only the sampling year is known. Blank cells indicate information is not available.

Attribute_Definition_Source: Author defined
Attribute_Domain_Values:

Range_Domain:

Range_Domain_Minimum: 19960501
Range_Domain_Maximum: 20140907
Attribute_Units_of_Measure: Date (YYYYMMDD)

Attribute:

Attribute_Label: collection_end
Attribute_Definition:

The ending date of the field sample collection. Blank cells indicate information is not available.

Attribute_Definition_Source: Author defined
Attribute_Domain_Values:

Range_Domain:

Range_Domain_Minimum: 19960501
Range_Domain_Maximum: 20140907
Attribute_Units_of_Measure: Date (YYYYMMDD)

Attribute:

Attribute_Label: location
Attribute_Definition: The state, territory or province of the sampling location
Attribute_Definition_Source: Author defined
Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: Alaska
Enumerated_Domain_Value_Definition: Sample collected in the state of Alaska, USA.
Enumerated_Domain_Value_Definition_Source: Geographic Names Information System (GNIS)

Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: British Columbia
Enumerated_Domain_Value_Definition: Sample collected in province of British Columbia, Canada
Enumerated_Domain_Value_Definition_Source: NGA GEOnet Names Server (GNS)

Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: Minnesota
Enumerated_Domain_Value_Definition: Sample collected in the state of Minnesota, USA
Enumerated_Domain_Value_Definition_Source: Geographic Names Information System (GNIS)

Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: New Jersey
Enumerated_Domain_Value_Definition: Sample collected in the state of New Jersey, USA
Enumerated_Domain_Value_Definition_Source: Geographic Names Information System (GNIS)

Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: North Dakota
Enumerated_Domain_Value_Definition: Sample collected in the state of North Dakota, USA
Enumerated_Domain_Value_Definition_Source: Geographic Names Information System (GNIS)

Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: Utah
Enumerated_Domain_Value_Definition: Sample collected in the state of Utah, USA
Enumerated_Domain_Value_Definition_Source: Geographic Names Information System (GNIS)

Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: Wisconsin
Enumerated_Domain_Value_Definition: Sample collected in the state of Wisconsin, USA
Enumerated_Domain_Value_Definition_Source: Geographic Names Information System (GNIS)

Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: Yukon Territory
Enumerated_Domain_Value_Definition: Sample collected in the Yukon Territory, Canada
Enumerated_Domain_Value_Definition_Source: NGA GEOnet Names Server (GNS)

Attribute:

Attribute_Label: country
Attribute_Definition: The country of the sampling location
Attribute_Definition_Source: Author defined
Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: USA
Enumerated_Domain_Value_Definition: Sample collected in United States of America
Enumerated_Domain_Value_Definition_Source: Geographic Names Information System (GNIS)

Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: Canada
Enumerated_Domain_Value_Definition: Sample collected in Canada
Enumerated_Domain_Value_Definition_Source: NGA GEOnet Names Server (GNS)

Attribute:

Attribute_Label: fieldSex
Attribute_Definition:

The sex reported to the laboratory by the source providing the DNA or DNA source tissue to the laboratory.

Attribute_Definition_Source: Author defined
Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: M
Enumerated_Domain_Value_Definition:

Sample was identified as a male in the field. This information provided to, but not generated by the laboratory.

Enumerated_Domain_Value_Definition_Source: Author defined

Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: F
Enumerated_Domain_Value_Definition:

Sample was identified as a female in the field. This information provided to, but not generated by the laboratory.

Enumerated_Domain_Value_Definition_Source: Author defined

Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: unk
Enumerated_Domain_Value_Definition: The sex of this sample was not provided to the lab.
Enumerated_Domain_Value_Definition_Source: Author defined

Attribute:

Attribute_Label: associated_manuscripts
Attribute_Definition:

Indicates whether the sample data have been analyzed and presented in any published manuscripts. Blank cells indicate that the sample was not presented in a published manuscript.

Attribute_Definition_Source: Author defined
Attribute_Domain_Values:

Enumerated_Domain:

Enumerated_Domain_Value: A
Enumerated_Domain_Value_Definition: Sample was used in the analysis for Haughey 2020.
Enumerated_Domain_Value_Definition_Source: Author defined

Attribute:

Attribute_Label: Bfib
Attribute_Definition:

GenBank Accession Number - unique identifier for Intron 7 of the nuclear beta-fibrinogen (FGB) gene sequence, assigned by the National Center for Biotechnology Information (NCBI). Blank cells indicate that sequence data from this locus were not collected for this sample.

Attribute_Definition_Source: NCBI GenBank
Attribute_Domain_Values:

Unrepresentable_Domain:

Unique identifier: GenBank accession number assigned by NCBI. Only representative unique sequences were submitted to Genbank for partial control regions of mtDNA and partial intron 7 of beta-fibrinogen, i.e. multiple individuals may have the same accession number if the sequences are identical to the original sequence submitted to Genbank. This number may be used to retrieve detailed sequence information from https://www.ncbi.nlm.nih.gov/

Attribute:

Attribute_Label: mtDNA
Attribute_Definition:

GenBank Accession Number - unique identifier for partial mitochondrial DNA (mtDNA) control region nucleotide sequence, assigned by the National Center for Biotechnology Information (NCBI). Blank cells indicate that sequence data from this locus were not collected for this sample.

Attribute_Definition_Source: NCBI GenBank
Attribute_Domain_Values:

Unrepresentable_Domain:

Attribute:

Attribute_Label: CHD_Gametolog1
Attribute_Definition:

Gametolog one from the chromo helicase DNA-binding gene (CHD) locus: genotype numbers were determined by scoring based on allele size relative to an M13 DNA sequence ladder and to samples established as size standards that were run on each gel. A blank cell indicates data were not collected at this locus for that sample.

Attribute_Definition_Source: Author defined
Attribute_Domain_Values:

Range_Domain:

Range_Domain_Minimum: 385
Range_Domain_Maximum: 390
Attribute_Units_of_Measure: base pairs

Attribute:

Attribute_Label: CHD_Gametolog2
Attribute_Definition:

Gametolog two from the chromo helicase DNA-binding gene (CHD) locus: genotype numbers were determined by scoring based on allele size relative to an M13 DNA sequence ladder and to samples established as size standards that were run on each gel. A blank cell indicates data were not collected at this locus for that sample.

Attribute_Definition_Source: Author defined
Attribute_Domain_Values:

Range_Domain:

Range_Domain_Minimum: 388
Range_Domain_Maximum: 390
Attribute_Units_of_Measure: base pairs

Attribute:

Attribute_Label: Age1302_allele1 through Age1322_allele2
Attribute_Definition:

These 40 columns represent twenty autosomal microsatellite loci. Each microsatellite locus genotype is represented by two adjacent columns (i.e., allele1 and allele2) each containing one allele score. Blank cells indicate data were not collected for this sample. NP indicates that no product was amplified from the sample.

Locus names and order of presentation: Age1302, Age1303, Age1304, Age1305, Age1306, Age1307, Age1308, Age1309, Age1310, Age1311, Age1312, Age1313, Age1314, Age1316, Age1317, Age1318, Age1319, Age1320, Age1321, Age1322

These microsatellite data cannot be combined with data generated outside the Alaska Science Center without molecular size calibration between laboratories.

Details and full citations for microsatellite loci are available at https://doi.org/10.5066/P9GJEX8Y

Attribute_Definition_Source: Author defined
Attribute_Domain_Values:

Unrepresentable_Domain: Allele scores (in base pairs) for each microsatellite locus.

Genetic Data from Three Accipiter Species, North America, 1996-2014

Metadata: